What is BEAST? BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict …

FigTree is a program for viewing trees, including summary information produced by TreeAnnotator, and producing publication quality figures.

Running BEAST for the first time This tutorial will guide you through running BEAST and some of its accessory programs to do a simple phylogenetic analysis. If you haven’t already, download and …

Using BEAGLE with BEAST BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics package. It can …

Downloading and installing BEAST on Windows BEAST is a software package for phylogenetic analysis with an emphasis on time-scaled trees.

Downloading and installing BEAST on UNIX/Linux BEAST is a software package for phylogenetic analysis with an emphasis on time-scaled trees.

BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed …

Tracer (now at version 1.7.2) is a software package for visualising and analysing the MCMC trace files generated through Bayesian phylogenetic inference. Tracer provides kernel density estimation, …

BEAST | Bayesian Evolutionary Analysis Sampling Trees. This is the main program that takes a control file generated by BEAUti and performs the analysis.

The BEAUti & The BEAST software packageBayesian Evolutionary Analysis Utility (BEAUti) BEAUti is a graphical user-interface (GUI) application for generating BEAST XML files. It is distributed in the …